STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8KEF0RRM domain-containing protein. (194 aa)    
Predicted Functional Partners:
A0A4S8JUX4
MIF4G domain-containing protein.
   
 0.953
A0A4S8IQL2
Uncharacterized protein.
   
 0.951
A0A4S8IVJ0
WD_REPEATS_REGION domain-containing protein.
    
 0.951
A0A4V4H3J3
Uncharacterized protein.
   
 0.951
A0A4V4H3Y7
Uncharacterized protein.
   
 0.947
A0A4S8IZX3
TOG domain-containing protein.
   
 0.944
A0A4S8J319
Nuclear cap-binding protein subunit 2.
    
 0.943
A0A4S8J4D3
Nuclear cap-binding protein subunit 2.
    
 0.943
A0A4S8K2J9
Uncharacterized protein.
   
 0.942
A0A4S8JZ29
U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region.
   
 0.934
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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