STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4V4H4I3Usp domain-containing protein. (162 aa)    
Predicted Functional Partners:
A0A4S8IHH4
Uncharacterized protein.
    
 0.942
A0A4S8J6H0
Uncharacterized protein.
   
 0.896
A0A4S8IDT1
Uncharacterized protein.
    
 0.892
A0A4S8K5U2
Uncharacterized protein.
    
 0.892
A0A4S8JDI0
Uncharacterized protein.
    
 0.871
A0A4S8IF78
Uncharacterized protein.
    
 0.857
A0A4S8K568
Uncharacterized protein.
    
 0.857
A0A4S8IEZ4
Uncharacterized protein.
    
 0.843
A0A4V4H4E1
Uncharacterized protein.
    
 0.843
A0A4S8K1S7
CPSF_A domain-containing protein.
    
 0.823
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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