STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0001690annotation not available (941 aa)    
Predicted Functional Partners:
BN2166_0057070
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
  
 0.998
BN2166_0026330
FGENESH: predicted gene_5.178 protein.
   
 0.997
BN2166_0026320
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.997
BN2166_0020660
BY PROTMAP: gi|647398251|emb|CDR41975.1| RHTO0S06e08416g2_1 [Rhodosporidium toruloides]; Belongs to the OSBP family.
   
 0.967
BN2166_0000900
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.965
BN2166_0052160
BY PROTMAP: gi|647394553|emb|CDR35784.1| RHTO0S01e07030g1_1 [Rhodosporidium toruloides].
   
 
 0.958
BN2166_0070180
FGENESH: predicted gene_16.44 protein.
  
 0.946
BN2166_0005400
Belongs to the heat shock protein 70 family.
  
 0.931
BN2166_0005480
BY PROTMAP: gi|342320723|gb|EGU12662.1| Cro r II [Rhodotorula glutinis ATCC 204091].
  
 0.931
BN2166_0018330
Hsp70 protein-domain containing protein; Belongs to the heat shock protein 70 family.
  
 0.923
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.