Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BN2166_0002340 | BN2166_0002580 | A0A0K3C6A2 | A0A0K3C6X4 | Uridine kinase; Belongs to the uridine kinase family. | Uncharacterized protein. | 0.418 |
| BN2166_0002340 | BN2166_0056380 | A0A0K3C6A2 | A0A0K3CM68 | Uridine kinase; Belongs to the uridine kinase family. | BY PROTMAP: gi|647399608|emb|CDR44506.1| RHTO0S09e05138g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. | 0.718 |
| BN2166_0002340 | BN2166_0073360 | A0A0K3C6A2 | A0A0K3CSH3 | Uridine kinase; Belongs to the uridine kinase family. | Vaculolar membrane protein-domain containing protein. | 0.674 |
| BN2166_0002450 | BN2166_0002580 | A0A0K3C483 | A0A0K3C6X4 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Uncharacterized protein. | 0.433 |
| BN2166_0002450 | BN2166_0011630 | A0A0K3C483 | A0A061AFY5 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | 0.975 |
| BN2166_0002450 | BN2166_0019910 | A0A0K3C483 | A0A0K3CC52 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | SCA7, zinc-binding domain-domain containing protein. | 0.994 |
| BN2166_0002450 | BN2166_0039620 | A0A0K3C483 | A0A0K3CLL4 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | BY PROTMAP: gi|342320443|gb|EGU12383.1| Spt3 [Rhodotorula glutinis ATCC 204091]. | 0.991 |
| BN2166_0002450 | BN2166_0039750 | A0A0K3C483 | A0A0K3CEG7 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | Histone acetyltransferases subunit 3-domain containing protein. | 0.989 |
| BN2166_0002450 | BN2166_0056380 | A0A0K3C483 | A0A0K3CM68 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | BY PROTMAP: gi|647399608|emb|CDR44506.1| RHTO0S09e05138g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. | 0.995 |
| BN2166_0002450 | BN2166_0058210 | A0A0K3C483 | A0A0K3CNB7 | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | annotation not available | 0.996 |
| BN2166_0002580 | BN2166_0002340 | A0A0K3C6X4 | A0A0K3C6A2 | Uncharacterized protein. | Uridine kinase; Belongs to the uridine kinase family. | 0.418 |
| BN2166_0002580 | BN2166_0002450 | A0A0K3C6X4 | A0A0K3C483 | Uncharacterized protein. | Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...] | 0.433 |
| BN2166_0002580 | BN2166_0004480 | A0A0K3C6X4 | A0A0K3C7D1 | Uncharacterized protein. | SUN domain-containing protein. | 0.454 |
| BN2166_0002580 | BN2166_0011630 | A0A0K3C6X4 | A0A061AFY5 | Uncharacterized protein. | Transcription and mRNA export factor SUS1; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. At the promoters, SAGA is required for recruitment of the basal transcription machinery. It influences RNA polymerase II transcriptional activity through different activities such as TBP interaction and promoter selectivity, interaction with transcription activators, and chromatin modification through histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex required for deubiquitination of [...] | 0.462 |
| BN2166_0002580 | BN2166_0019910 | A0A0K3C6X4 | A0A0K3CC52 | Uncharacterized protein. | SCA7, zinc-binding domain-domain containing protein. | 0.453 |
| BN2166_0002580 | BN2166_0039620 | A0A0K3C6X4 | A0A0K3CLL4 | Uncharacterized protein. | BY PROTMAP: gi|342320443|gb|EGU12383.1| Spt3 [Rhodotorula glutinis ATCC 204091]. | 0.489 |
| BN2166_0002580 | BN2166_0039750 | A0A0K3C6X4 | A0A0K3CEG7 | Uncharacterized protein. | Histone acetyltransferases subunit 3-domain containing protein. | 0.439 |
| BN2166_0002580 | BN2166_0056380 | A0A0K3C6X4 | A0A0K3CM68 | Uncharacterized protein. | BY PROTMAP: gi|647399608|emb|CDR44506.1| RHTO0S09e05138g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family. | 0.442 |
| BN2166_0002580 | BN2166_0058210 | A0A0K3C6X4 | A0A0K3CNB7 | Uncharacterized protein. | annotation not available | 0.433 |
| BN2166_0002580 | BN2166_0073360 | A0A0K3C6X4 | A0A0K3CSH3 | Uncharacterized protein. | Vaculolar membrane protein-domain containing protein. | 0.449 |
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