STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0022700annotation not available (492 aa)    
Predicted Functional Partners:
BN2166_0000300
BY PROTMAP: gi|342320601|gb|EGU12540.1| putative dUTPase Dut [Rhodotorula glutinis ATCC 204091].
   
 0.751
BN2166_0052610
annotation not available
    
 0.667
BN2166_0061840
Uncharacterized protein.
    
 0.650
BN2166_0054770
ERCC4 domain-containing protein.
    
 0.617
BN2166_0009130
Restriction endonuclease type II-like protein.
    
 0.591
BN2166_0039050
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.590
BN2166_0027880
NPL4 family-domain containing protein.
    
 0.575
BN2166_0037600
Nuclear transport factor 2.
    
 0.570
BN2166_0039440
annotation not available
    
  0.547
BN2166_0053380
RNase P subunit p30-domain containing protein.
    
 0.541
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.