STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0013980annotation not available (699 aa)    
Predicted Functional Partners:
BN2166_0069850
annotation not available
  
 
 0.824
BN2166_0041960
BY PROTMAP: gi|647395945|emb|CDR37871.1| RHTO0S03e00496g1_1 [Rhodosporidium toruloides].
  
 
0.822
BN2166_0002660
BY PROTMAP: gi|342319354|gb|EGU11303.1| Fatty acid synthase [Rhodotorula glutinis ATCC 204091].
   
 0.815
BN2166_0003600
Fatty acid synthase subunit beta.
   
 0.811
BN2166_0027210
Thiolase-like protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.789
BN2166_0068790
annotation not available
  
 
 0.789
BN2166_0029580
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
     
 0.784
BN2166_0061310
Alpha/Beta hydrolase fold.
     
 0.784
BN2166_0003390
annotation not available
    
 0.777
BN2166_0036420
Belongs to the peptidase C19 family.
    
 0.767
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.