STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0005220annotation not available (359 aa)    
Predicted Functional Partners:
BN2166_0074300
BY PROTMAP: gi|816335186|gb|KKK15214.1| GTP-binding protein [Aspergillus ochraceoroseus].
   
 
 0.991
BN2166_0024860
annotation not available
   
 
 0.947
BN2166_0058680
BY PROTMAP: gi|647398523|emb|CDR42540.1| RHTO0S07e00760g1_1 [Rhodosporidium toruloides].
   
 
 0.925
BN2166_0047820
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.859
BN2166_0058000
BY PROTMAP: gi|647399425|emb|CDR44186.1| RHTO0S09e00980g1_1 [Rhodosporidium toruloides]; Belongs to the universal ribosomal protein uL23 family.
   
   0.858
BN2166_0004210
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
   0.853
BN2166_0020970
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
   0.846
BN2166_0057010
annotation not available
   
   0.840
BN2166_0061030
BY PROTMAP: gi|342321152|gb|EGU13087.1| mRNA export factor elf1 [Rhodotorula glutinis ATCC 204091].
   
 
 0.798
BN2166_0061020
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.798
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.