STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0027590Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives; Belongs to the radical SAM superfamily. Lipoyl synthase family. (1051 aa)    
Predicted Functional Partners:
BN2166_0025800
BY PROTMAP: gi|647395677|emb|CDR37293.1| RHTO0S02e13036g1_1 [Rhodosporidium toruloides].
 
 
 0.975
BN2166_0033800
BPL/LPL catalytic domain-containing protein.
  
 
 0.954
BN2166_0036920
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
   
 0.911
BN2166_0038770
BY PROTMAP: gi|342320478|gb|EGU12418.1| putative NUDIX domain [Rhodotorula glutinis ATCC 204091]; Belongs to the Nudix hydrolase family.
    
  0.767
BN2166_0022390
Beta-lactamase-like protein.
    
 0.763
BN2166_0022490
annotation not available
    
 0.763
BN2166_0024780
BY PROTMAP: gi|342320825|gb|EGU12763.1| Nitrilase [Rhodotorula glutinis ATCC 204091].
    
 0.692
BN2166_0041820
Nitrilase/cyanide hydratase and apolipo protein N-acyltransferase.
    
 0.692
BN2166_0030750
annotation not available
    
 0.626
BN2166_0031810
Putative iron homeostasis-related protein.
  
 
 0.622
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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