STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0024370BY PROTMAP: gi|647403312|emb|CDR49454.1| RHTO0S26e02124g1_1 [Rhodosporidium toruloides]. (524 aa)    
Predicted Functional Partners:
BN2166_0060350
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
 
 0.999
BN2166_0052570
Uncharacterized protein.
   
 0.988
BN2166_0040530
BY PROTMAP: gi|647401519|emb|CDR47812.1| RHTO0S15e02322g1_1 [Rhodosporidium toruloides].
 0.969
BN2166_0043320
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.968
BN2166_0069690
Putative URM1 activating enzyme.
   
 0.954
BN2166_0031810
Putative iron homeostasis-related protein.
  
 0.952
BN2166_0056580
HAD-like domain-containing protein.
    
 0.916
BN2166_0045930
BY PROTMAP: gi|647397094|emb|CDR39862.1| RHTO0S04e11056g1_1 [Rhodosporidium toruloides].
   
 0.868
BN2166_0046020
annotation not available
   
 0.868
BN2166_0029050
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.859
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.