STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0050780annotation not available (932 aa)    
Predicted Functional Partners:
BN2166_0015330
annotation not available
    
 0.794
BN2166_0035390
BY PROTMAP: gi|342319749|gb|EGU11696.1| Nitrate reductase [Rhodotorula glutinis ATCC 204091].
    
 0.794
BN2166_0038620
Cyclin-dependent protein kinase inhibitor.
    
 0.731
BN2166_0048370
DRIM domain-containing protein.
   
  0.674
BN2166_0067970
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
  0.632
BN2166_0013310
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.629
BN2166_0027300
BY PROTMAP: gi|814542092|emb|CEQ40515.1| SPOSA6832_02136, partial [Sporidiobolus salmonicolor].
    
  0.629
BN2166_0010620
Ribosome biogenesis protein Noc4.
    
  0.629
BN2166_0034360
annotation not available
    
  0.629
BN2166_0027870
annotation not available
    
  0.629
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.