STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0052210annotation not available (547 aa)    
Predicted Functional Partners:
BN2166_0072040
WD40-repeat-containing domain protein.
   
 0.966
BN2166_0050960
BY PROTMAP: gi|342321257|gb|EGU13191.1| YEATS family protein [Rhodotorula glutinis ATCC 204091].
    
 0.955
BN2166_0065950
BY PROTMAP: gi|342319001|gb|EGU10953.1| Proteophosphoglycan ppg4 [Rhodotorula glutinis ATCC 204091].
   
 0.946
BN2166_0045560
Enhancer of polycomb-like protein.
    
 0.942
BN2166_0056380
BY PROTMAP: gi|647399608|emb|CDR44506.1| RHTO0S09e05138g1_1 [Rhodosporidium toruloides]; Belongs to the PI3/PI4-kinase family.
   
 0.934
BN2166_0039020
Uncharacterized protein.
    
 
 0.923
BN2166_0052620
Histone acetyltransferase subunit NuA4-domain containing protein.
   
 0.923
BN2166_0049680
annotation not available
    
 0.915
BN2166_0060370
Uncharacterized protein; Belongs to the actin family.
   
 0.897
BN2166_0004420
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 0.893
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.