STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN2166_0058910Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II. (687 aa)    
Predicted Functional Partners:
BN2166_0001450
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.876
BN2166_0026830
Uncharacterized protein.
   
 0.721
BN2166_0022600
Putative GTP-binding protein ypt1.
    
 
 0.719
BN2166_0036000
annotation not available
    
 0.659
BN2166_0037470
Uncharacterized protein.
    
 0.659
BN2166_0022830
annotation not available
    
 0.648
BN2166_0010750
Uncharacterized protein.
    
 0.643
BN2166_0015470
Nuclear movement protein nudC.
    
  0.639
BN2166_0010420
BY PROTMAP: gi|342319914|gb|EGU11859.1| Membrane protein [Rhodotorula glutinis ATCC 204091].
    
  0.631
BN2166_0025470
FGENESH: predicted gene_5.92 protein.
    
  0.631
Your Current Organism:
Rhodotorula toruloides
NCBI taxonomy Id: 5286
Other names: CBS 6016, IFO 8766, IGC 5615, MUCL 28631, NRRL Y-6987, R. toruloides, Rhodosporidium toruloides, Rhodotorula gracilis, Rhodotorula rubescens, Rhodotorula toruloides (I. Banno) Q.M. Wang, F.Y. Bai, M. Groenew. & Boekhout, 2015
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.