STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022436Putative ceramide synthase 4. (407 aa)    
Predicted Functional Partners:
SMAX5B_004793
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.908
SMAX5B_019726
Putative sphingosine-1-phosphate phosphatase 1-like.
    
 0.895
SGPP2
Putative sphingosine-1-phosphate phosphatase 2.
    
 0.895
SMAX5B_011340
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.890
SMAX5B_022651
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
    
 0.890
SMAX5B_000432
Putative sphingolipid delta(4)-desaturase/C4-hydroxylase DES2.
   
 0.879
SMAX5B_008706
Putative sphingolipid delta(4)-desaturase DES1.
   
 0.879
SMAX5B_010283
Putative lipid phosphate phosphohydrolase 1-like.
    
 0.877
SMAX5B_013871
Putative lipid phosphate phosphohydrolase 1 isoform 2.
    
 0.877
SMAX5B_022660
Putative lipid phosphate phosphohydrolase 2.
    
 0.877
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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