STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004400Vps51 domain containing protein. (989 aa)    
Predicted Functional Partners:
SMAX5B_019917
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.999
SMAX5B_004721
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.999
SMAX5B_020069
Component of oligomeric golgi complex 7.
    
 0.999
COG5
Uncharacterized protein.
    
 0.999
SMAX5B_018384
Sec34 domain containing protein.
   
 0.999
SMAX5B_005377
Component of oligomeric golgi complex 2.
   
 0.999
SMAX5B_012469
COG4 domain containing protein.
    
 0.983
SMAX5B_022469
Small integral membrane protein 7.
    
 0.971
SMAX5B_009437
Syntaxin 5A isoform 2; Belongs to the PDGF/VEGF growth factor family.
     
 0.855
SMAX5B_004246
C11orf2.
   
 
 0.847
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.