STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012892Putative immune-type receptor 5. (334 aa)    
Predicted Functional Partners:
SMAX5B_007298
Uncharacterized protein.
    
  0.745
ENSSMAP00000005372
Zgc:123107.
   
  0.695
PTK7
Putative inactive tyrosine-protein kinase 7; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
  0.656
SMAX5B_007336
Putative rhomboid-related protein 3; Belongs to the peptidase S54 family.
    
  0.634
SMAX5B_001037
Putative WD repeat-containing protein 18.
   
 0.609
SMAX5B_004819
Putative receptor-interacting serine/threonine-protein kinase 4.
   
 0.603
SMAX5B_015882
MHC class Ia chain isoform 2; Belongs to the MHC class I family.
   
  0.602
SMAX5B_011681
Ipi1_N domain-containing protein.
   
 0.582
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.578
SMAX5B_015573
60S ribosomal protein L30.
    
  0.547
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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