STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020338Putative 1-phosphatidylinositol 4-5-bisphosphate phosphodiesterase epsilon-1. (1952 aa)    
Predicted Functional Partners:
CSDE1
Putative cold shock domain-containing protein E1 isoform 3.
    
 0.929
SMAX5B_009841
GTPase KRas.
    
 0.929
SMAX5B_009799
Putative GTPase HRas-like.
    
 0.929
SMAX5B_020836
Ras domain containing protein.
    
 0.929
INPP5A
INPP5A.
   
 
 0.914
SMAX5B_010924
MGC123248.
   
 
 0.905
SMAX5B_018589
Ras-related protein m-ras.
   
  0.898
SMAX5B_001396
Uncharacterized protein.
   
  0.883
ENSSMAP00000035027
RAS related 2.
   
  0.883
SMAX5B_003193
Putative phosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family.
     
 0.879
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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