STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014956Putative olfactomedin-like protein 3B. (402 aa)    
Predicted Functional Partners:
ENSSMAP00000029950
Collagen, type X, alpha 1b.
      
 0.449
SMAX5B_003549
Putative netrin receptor UNC5C-like.
    
   0.414
SMAX5B_019044
Putative netrin receptor UNC5A isoform 2.
    
   0.414
SMAX5B_013830
Putative netrin receptor UNC5D.
    
   0.414
SMAX5B_005704
Putative netrin receptor UNC5D-like.
    
   0.414
SMAX5B_016554
Putative netrin receptor UNC5C.
    
   0.414
SMAX5B_002182
Putative SUZ domain-containing protein 1-like.
    
 
 0.411
SMAX5B_019906
Putative teneurin-4-like.
    
 
 0.411
SMAX5B_002623
Putative SUZ domain-containing protein 1-like.
    
 
 0.411
ENSSMAP00000015820
annotation not available
    
 
 0.411
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.