STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018568UDP-glucuronic acid decarboxylase 1. (419 aa)    
Predicted Functional Partners:
SMAX5B_007388
Putative UDP-glucose 6-dehydrogenase.
 0.997
SMAX5B_002812
Mannose-1-phosphate guanyltransferase beta.
  
 0.951
SMAX5B_008251
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.944
SMAX5B_003427
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
0.934
ENSSMAP00000029240
GDP-mannose 4,6-dehydratase.
  
0.931
SMAX5B_013590
Putative dTDP-D-glucose 4-6-dehydratase.
 
 
0.930
SMAX5B_018593
Mannose-1-phosphate guanyltransferase alpha-A.
  
 0.917
SMAX5B_009810
Putative GDP-D-glucose phosphorylase 1.
     
 0.907
SMAX5B_011302
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
 
 
 0.904
SMAX5B_002315
Putative GDH/6PGL endoplasmic bifunctional protein.
  
 0.894
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.