STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbcLRibulose bisophosphate carboxylase; Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily. (421 aa)    
Predicted Functional Partners:
AEH24773.1
Phosphoglycolate phosphatase; Catalyzes the dephosphorylation of 2-phosphoglycolate.
 
  
  0.912
AEH24173.1
AMP phosphorylase; Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily.
 
   
 0.760
AEH25329.1
Translation initiation factor IF-2B subunit delta; Belongs to the eIF-2B alpha/beta/delta subunits family.
 
  
 0.746
AEH25310.1
L-fuculose 1-phosphate aldolase (fucA).
  
  
 0.682
AEH24349.1
Pyruvate ferredoxin oxidoreductase subunit alpha.
   
  
 0.670
AEH24180.1
Ferripyochelin binding protein.
   
 
 0.646
AEH23719.1
Hydrogenase-specific maturation endopeptidase.
     
 0.640
AEH23989.1
ATPase.
     
 0.628
AEH23720.1
Hypothetical protein.
       0.625
AEH23721.1
Hypothetical protein.
       0.625
Your Current Organism:
Pyrococcus yayanosii
NCBI taxonomy Id: 529709
Other names: P. yayanosii CH1, Pyrococcus sp. CH1, Pyrococcus yayanosii CH1, Pyrococcus yayanosii str. CH1, Pyrococcus yayanosii strain CH1
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