Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEH23976.1 | AEH23977.1 | PYCH_02790 | PYCH_02800 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Sodium/alanine symporter. | 0.877 |
AEH23976.1 | AEH23997.1 | PYCH_02790 | PYCH_03000 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Hypothetical protein. | 0.900 |
AEH23976.1 | AEH24031.1 | PYCH_02790 | PYCH_03360 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.906 |
AEH23976.1 | AEH24721.1 | PYCH_02790 | PYCH_10400 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Carbon-nitrogen hydrolase. | 0.504 |
AEH23976.1 | AEH24775.1 | PYCH_02790 | PYCH_10940 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.906 |
AEH23976.1 | aspS | PYCH_02790 | PYCH_04180 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). | 0.606 |
AEH23976.1 | mfnA | PYCH_02790 | PYCH_06120 | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-tyrosine decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily. | 0.939 |
AEH23977.1 | AEH23976.1 | PYCH_02800 | PYCH_02790 | Sodium/alanine symporter. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.877 |
AEH23977.1 | AEH24031.1 | PYCH_02800 | PYCH_03360 | Sodium/alanine symporter. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.617 |
AEH23977.1 | AEH24775.1 | PYCH_02800 | PYCH_10940 | Sodium/alanine symporter. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.623 |
AEH23977.1 | aspS | PYCH_02800 | PYCH_04180 | Sodium/alanine symporter. | aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). | 0.602 |
AEH23997.1 | AEH23976.1 | PYCH_03000 | PYCH_02790 | Hypothetical protein. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.900 |
AEH23997.1 | AEH24031.1 | PYCH_03000 | PYCH_03360 | Hypothetical protein. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.900 |
AEH23997.1 | AEH24775.1 | PYCH_03000 | PYCH_10940 | Hypothetical protein. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.900 |
AEH23997.1 | mfnA | PYCH_03000 | PYCH_06120 | Hypothetical protein. | L-tyrosine decarboxylase; Catalyzes the decarboxylation of L-aspartate to produce beta- alanine; Belongs to the group II decarboxylase family. MfnA subfamily. | 0.936 |
AEH24029.1 | AEH24030.1 | PYCH_03340 | PYCH_03350 | Cell division protein 48 (CDC48), domain 2. | Transcription regulator. | 0.783 |
AEH24029.1 | AEH24031.1 | PYCH_03340 | PYCH_03360 | Cell division protein 48 (CDC48), domain 2. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.547 |
AEH24029.1 | nth | PYCH_03340 | PYCH_03330 | Cell division protein 48 (CDC48), domain 2. | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. | 0.818 |
AEH24030.1 | AEH24029.1 | PYCH_03350 | PYCH_03340 | Transcription regulator. | Cell division protein 48 (CDC48), domain 2. | 0.783 |
AEH24030.1 | AEH24031.1 | PYCH_03350 | PYCH_03360 | Transcription regulator. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.646 |
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