STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIC47768.1Hypothetical protein. (291 aa)    
Predicted Functional Partners:
AIC47769.1
Sugar kinase, ribokinase family.
  
 0.987
AIC47766.1
Putative enzyme involved in inositol metabolism; 5-deoxyglucuronate isomerase.
 
    0.942
AIC47765.1
Acetolactate synthase; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
    0.808
AIC47760.1
Transcriptional regulator, GntR family.
 
     0.799
AIC47767.1
Methylmalonic acid semialdehyde dehydrogenase.
  
  
 0.783
AIC47764.1
Sugar phosphate isomerase/epimerase.
 
    0.773
AIC47762.1
Sugar phosphate isomerase/epimerase.
 
    0.698
AIC46934.1
Hypothetical protein.
  
  
 0.454
iolG
Putative dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
     0.434
AIC47770.1
Hypothetical protein.
       0.411
Your Current Organism:
Rhodoluna lacicola
NCBI taxonomy Id: 529884
Other names: Candidatus Rhodoluna lacicola, DSM 23834, LMG 26932, LMG:26932, R. lacicola, Rhodoluna lacicola Hahn et al. 2014, actinobacterium MWH-Ta8, strain MWH-Ta8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.