STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psta_2028Response regulator receiver protein; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: psa:PST_3895 oxidoreductase, short-chain dehydrogenase/reductase family. (265 aa)    
Predicted Functional Partners:
Psta_3574
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: afr:AFE_2225 glucose 1-dehydrogenase, putative.
  
  
 
0.922
Psta_3187
PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: mxa:MXAN_6169 oxidoreductase, zinc-binding dehydrogenase family.
  
 
  0.912
Psta_4204
PFAM: SMP-30/Gluconolaconase/LRE domain protein; protein of unknown function DUF323; KEGG: mex:Mext_0612 gluconolactonase.
  
 
 0.902
Psta_1774
PFAM: SMP-30/Gluconolaconase/LRE domain protein; NHL repeat containing protein; KEGG: sus:Acid_3430 gluconolactonase.
   
 
  0.900
Psta_1780
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: mmr:Mmar10_2728 gluconolactonase.
   
 
  0.900
Psta_4311
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pna:Pnap_0570 SMP-30/gluconolaconase/LRE domain protein.
   
 
  0.900
Psta_4714
KEGG: bha:BH3560 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
 0.841
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
   
 0.819
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 0.813
Psta_3289
PFAM: Lactate/malate dehydrogenase; KEGG: scl:sce5245 L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
   
 0.812
Your Current Organism:
Pirellula staleyi
NCBI taxonomy Id: 530564
Other names: P. staleyi DSM 6068, Pirellula staleyi ATCC 27377, Pirellula staleyi DSM 6068, Pirellula staleyi str. DSM 6068, Pirellula staleyi strain DSM 6068
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