Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
FIC_01731 | FIC_01732 | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | 0.934 |
FIC_01731 | FIC_01733 | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | Endo-1,4-beta-xylanase A precursor. | 0.944 |
FIC_01731 | FIC_01735 | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | Protein of unknown function DUF303, acetylesterase putative. | 0.912 |
FIC_01731 | FIC_01737 | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | Hypothetical protein. | 0.870 |
FIC_01731 | FIC_01738 | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.800 |
FIC_01731 | FIC_01741 | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | RagB/SusD domain protein. | 0.428 |
FIC_01731 | FIC_01869 | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | Rhamnogalacturonan acetylesterase. | 0.511 |
FIC_01732 | FIC_01731 | Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | 0.934 |
FIC_01732 | FIC_01733 | Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | Endo-1,4-beta-xylanase A precursor. | 0.983 |
FIC_01732 | FIC_01735 | Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | Protein of unknown function DUF303, acetylesterase putative. | 0.927 |
FIC_01732 | FIC_01737 | Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.789 |
FIC_01732 | FIC_01738 | Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.776 |
FIC_01733 | FIC_01731 | Endo-1,4-beta-xylanase A precursor. | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | 0.944 |
FIC_01733 | FIC_01732 | Endo-1,4-beta-xylanase A precursor. | Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | 0.983 |
FIC_01733 | FIC_01735 | Endo-1,4-beta-xylanase A precursor. | Protein of unknown function DUF303, acetylesterase putative. | 0.932 |
FIC_01733 | FIC_01737 | Endo-1,4-beta-xylanase A precursor. | Hypothetical protein. | 0.901 |
FIC_01733 | FIC_01738 | Endo-1,4-beta-xylanase A precursor. | Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.919 |
FIC_01735 | FIC_01731 | Protein of unknown function DUF303, acetylesterase putative. | Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. | 0.912 |
FIC_01735 | FIC_01732 | Protein of unknown function DUF303, acetylesterase putative. | Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family. | 0.927 |
FIC_01735 | FIC_01733 | Protein of unknown function DUF303, acetylesterase putative. | Endo-1,4-beta-xylanase A precursor. | 0.932 |
page 1 of 4