STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_01856BatD. (579 aa)    
Predicted Functional Partners:
FIC_01855
BatC.
 
 
 0.956
FIC_01854
BatB.
 
   
 0.915
FIC_01853
BatA (Bacteroides aerotolerance operon).
 
  
 0.897
FIC_01851
Hypothetical protein; Similar to PA3071.
 
  
 0.896
FIC_01852
Hypothetical protein.
 
   
 0.871
FIC_01850
MoxR-like ATPase in aerotolerance operon.
 
  
 0.679
FIC_01857
Multiple antibiotic resistance protein marC.
       0.643
FIC_01062
TPR repeat protein.
 
 
 0.641
FIC_01858
Hypothetical protein.
       0.611
FIC_01761
Hypothetical protein.
 
     0.584
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.