STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIC_02202Cytoplasmic alpha-amylase. (489 aa)    
Predicted Functional Partners:
FIC_00730
Periplasmic alpha-amylase.
   
  0.954
glgB
1,4-alpha-glucan (glycogen) branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.927
FIC_01628
Glycogen phosphorylase.
  
 0.925
FIC_00399
4-alpha-glucanotransferase (amylomaltase).
  
 
 0.918
FIC_01727
Alpha-amylase, putative.
  
  
  0.912
FIC_01780
1,4-alpha-glucan branching enzyme.
  
  
  0.912
FIC_00545
Alpha-glucosidase.
  
 
 0.902
FIC_00604
Amino acid permease.
   
 0.553
FIC_00996
Amino acid permease-associated region.
   
 0.553
FIC_01443
Amino acid permease-associated region.
   
 0.553
Your Current Organism:
Flavobacteriaceae bacterium 351910
NCBI taxonomy Id: 531844
Other names: F. bacterium 3519-10, Flavobacteriaceae bacterium 3519-10
Server load: medium (62%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.