STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMYG_SCHCMGlucoamylase ARB_02327-1. (576 aa)    
Predicted Functional Partners:
D8Q478_SCHCM
Glycoside hydrolase family 13 protein.
     
 0.965
D8PW28_SCHCM
Glycoside hydrolase family 13 protein.
     
 0.964
D8Q5Z0_SCHCM
Glycoside hydrolase family 13 protein.
     
 0.964
D8QG27_SCHCM
Glycoside hydrolase family 13 protein.
     
 0.964
D8Q7N0_SCHCM
Glycoside hydrolase family 13 protein.
     
 0.963
D8Q8W0_SCHCM
Alpha-amylase.
     
 0.963
D8QFE0_SCHCM
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 
 0.945
D8PS34_SCHCM
Glycoside hydrolase family 13 protein.
  
 
 0.941
D8Q378_SCHCM
Glycoside hydrolase family 13 protein.
   
 
 0.921
D8PUK9_SCHCM
Glycoside hydrolase family 31 protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.907
Your Current Organism:
Schizophyllum commune
NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.