STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
K5XA39_AGABUProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (331 aa)    
Predicted Functional Partners:
K5WY59_AGABU
CID domain-containing protein.
    
 
 0.982
K5XJ33_AGABU
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.957
K5Y3Z0_AGABU
Uncharacterized protein; Belongs to the cyclin family.
   
 0.948
K5XK90_AGABU
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
   
 0.784
K5XME3_AGABU
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 0.767
K5X794_AGABU
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
 0.762
K5W4U4_AGABU
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.755
K5W2E9_AGABU
RPOLD domain-containing protein.
   
 0.739
K5XVX6_AGABU
CPSF_A domain-containing protein.
    
 
 0.718
K5Y4A1_AGABU
Uncharacterized protein.
    
 0.687
Your Current Organism:
Agaricus bisporus
NCBI taxonomy Id: 597362
Other names: A. bisporus var. burnettii JB137-S8, Agaricus bisporus var. burnettii JB137-S8
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