STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANZ59055.1Arginine-ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)    
Predicted Functional Partners:
ANZ58959.1
Glucohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.609
ANZ59056.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.568
ANZ59057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.568
ANZ59054.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.526
ANZ59053.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
ANZ59052.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.504
Your Current Organism:
Lactobacillus lindneri
NCBI taxonomy Id: 53444
Other names: CIP 102983, DSM 20690, JCM 11027, L. lindneri, LMG 14528, LMG:14528, strain KPA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.