STRINGSTRING
CC1G_02848 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_02848" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_02848Uncharacterized protein (229 aa)    
Predicted Functional Partners:
CC1G_14439
Vacuolar amino acid transporter 4 (740 aa)
           
  0.778
CC1G_08202
Ribitol kinase (645 aa)
           
  0.680
CC1G_14687
GPI inositol-deacylase (928 aa)
           
  0.677
CC1G_09913
Vesicle membrane protein with acyltransferase activity; Belongs to the synaptobrevin family (199 aa)
           
  0.667
CC1G_12413
Uridine/cytidine kinase (508 aa)
     
   
  0.603
CC1G_02253
Uncharacterized protein (935 aa)
           
  0.593
CC1G_00485
3-methyl-2-oxobutanoate hydroxymethyltransferase (590 aa)
     
   
  0.532
CC1G_06625
Pantothenate kinase (520 aa)
           
  0.531
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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