STRINGSTRING
CC1G_12168 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_12168" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_12168Uncharacterized protein (362 aa)    
Predicted Functional Partners:
CC1G_06569
Mitochondrial processing peptidase (518 aa)
       
      0.562
CC1G_06879
NAD+ diphosphatase (477 aa)
         
  0.516
CC1G_05203
phosphoribosyl-ATP diphosphatase; Belongs to the Nudix hydrolase family (189 aa)
           
  0.483
CC1G_14371
Uncharacterized protein (134 aa)
           
  0.420
CC1G_15045
Mitochondrial-processing peptidase subunit beta; Belongs to the peptidase M16 family (754 aa)
       
      0.420
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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