STRINGSTRING
CC1G_12071 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_12071" - CGI-48 family protein in Coprinopsis cinerea
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_12071CGI-48 family protein (804 aa)    
Predicted Functional Partners:
CC1G_06538
U3 small nucleolar RNA-associated protein (910 aa)
     
 
  0.999
CC1G_03596
WD repeat-containing protein (937 aa)
     
 
  0.999
CC1G_14209
U3 snoRNP protein (667 aa)
     
 
  0.999
CC1G_01231
WD-repeat-containing protein (926 aa)
     
 
  0.999
CC1G_04441
U3 small nucleolar RNA-associated protein 4 (991 aa)
     
 
  0.998
CC1G_00329
kDa Trp-Asp repeats containing protein (519 aa)
     
 
  0.998
CC1G_00216
WD-repeat-containing protein (956 aa)
     
 
  0.998
CC1G_08122
Nucleolar protein 14 (942 aa)
     
 
  0.996
CC1G_09118
Uncharacterized protein (1994 aa)
     
 
  0.996
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA-binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1123 aa)
     
 
  0.996
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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