STRINGSTRING
CC1G_04330 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04330" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04330Uncharacterized protein (841 aa)    
Predicted Functional Partners:
CC1G_13616
Uncharacterized protein (797 aa)
     
   
  0.832
CC1G_01117
ATP-dependent DNA helicase MER3 (1421 aa)
     
 
  0.815
CC1G_03320
Spo11 (353 aa)
           
  0.684
CC1G_13577
Uncharacterized protein (210 aa)
 
            0.665
CC1G_00424
Activating signal cointegrator 1 complex subunit 3 (1486 aa)
     
 
  0.631
CC1G_14982
mutS 5 family protein (371 aa)
     
   
  0.605
CC1G_14981
DNA mismatch repair protein Msh5 (383 aa)
     
   
  0.605
CC1G_01808
Rad51; Belongs to the RecA family (364 aa)
           
  0.605
CC1G_13889
Uncharacterized protein (699 aa)
     
 
  0.539
CC1G_13888
Uncharacterized protein (124 aa)
     
 
  0.539
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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