STRINGSTRING
CC1G_04408 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_04408" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_04408Uncharacterized protein (622 aa)    
Predicted Functional Partners:
CC1G_08102
Ku70 (559 aa)
     
 
  0.857
CC1G_13904
Uncharacterized protein (265 aa)
     
 
  0.781
CC1G_15741
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily (848 aa)
     
 
  0.751
CC1G_01113
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single-stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism (604 aa)
     
 
  0.743
CC1G_08633
Ku80 (855 aa)
       
 
  0.724
CC1G_05633
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (368 aa)
     
 
  0.716
CC1G_02550
Exodeoxyribonuclease 1 (895 aa)
     
 
  0.700
CC1G_04463
ATP-dependent DNA helicase (675 aa)
     
 
  0.699
CC1G_07167
Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems; Belongs to the Cu-Zn superoxide dismutase family (193 aa)
           
  0.658
CC1G_00839
atypical/PIKK/ATM protein kinase (2922 aa)
     
 
  0.651
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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