STRINGSTRING
CC1G_08649 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_08649" - Branched-chain-amino-acid aminotransferase in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_08649Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (525 aa)    
Predicted Functional Partners:
CC1G_04981
Dihydroxy-acid dehydratase (598 aa)
   
  0.966
CC1G_12638
Dihydroxy-acid dehydratase (585 aa)
   
  0.966
CC1G_02992
Branched-chain alpha-keto acid dehydrogenase E1-alpha subunit (449 aa)
   
 
  0.957
CC1G_01077
2-isopropylmalate synthase (791 aa)
   
  0.943
CC1G_01195
Pyruvate dehydrogenase (429 aa)
   
  0.929
CC1G_02572
Cystathionine gamma-lyase (560 aa)
   
  0.922
CC1G_02540
Cystathionine gamma-synthase (680 aa)
   
  0.919
CC1G_07135
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate (334 aa)
       
  0.912
CC1G_05398
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate (337 aa)
       
  0.912
CC1G_06863
Threonine ammonia-lyase (545 aa)
   
 
  0.907
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (10%) [HD]