STRINGSTRING
CC1G_11226 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11226" - Smap1 protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11226Smap1 protein (379 aa)    
Predicted Functional Partners:
CC1G_01331
ARF GTPase activator (404 aa)
     
  0.942
CC1G_03071
ARF GTPase activator (498 aa)
     
0.878
CC1G_11763
CDC5 (822 aa)
     
      0.734
CC1G_05661
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1700 aa)
     
 
  0.706
CC1G_03665
ARF guanyl-nucleotide exchange factor (1257 aa)
     
 
  0.694
CC1G_06818
CPS1 protein; Belongs to the small GTPase superfamily. Arf family (182 aa)
       
 
  0.675
CC1G_00053
Small monomeric GTPase; Belongs to the small GTPase superfamily. Arf family (187 aa)
     
 
  0.664
CC1G_00354
VID27 cytoplasmic protein (771 aa)
           
  0.622
CC1G_00149
ADP-ribosylation factor Arf1; Belongs to the small GTPase superfamily. Arf family (181 aa)
     
 
  0.582
CC1G_00277
Sec7p (1927 aa)
     
 
  0.562
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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