STRINGSTRING
CC1G_11296 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_11296" - DCP2 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_11296DCP2 (679 aa)    
Predicted Functional Partners:
CC1G_05252
Uncharacterized protein (756 aa)
     
 
  0.968
CC1G_12048
Topoisomerase II (1015 aa)
     
 
  0.962
CC1G_01373
Uncharacterized protein (261 aa)
       
 
  0.961
CC1G_10559
Uncharacterized protein (443 aa)
     
 
  0.960
CC1G_01067
ATP dependent helicase (1079 aa)
     
 
  0.937
CC1G_11892
5’-3’ exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1468 aa)
     
 
  0.911
CC1G_08578
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family (509 aa)
     
 
  0.900
CC1G_06738
Uncharacterized protein (116 aa)
       
 
  0.891
CC1G_04648
U6 snRNA-associated Sm-like protein LSm4 (129 aa)
     
 
  0.882
CC1G_14175
Small nuclear ribonucleoprotein LSM2 (73 aa)
       
 
  0.874
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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