STRINGSTRING
CC1G_06731 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06731" - Protein transporter SEC9 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06731Protein transporter SEC9 (352 aa)    
Predicted Functional Partners:
CC1G_15423
Uncharacterized protein (143 aa)
     
 
  0.960
CC1G_06551
Uncharacterized protein (1100 aa)
     
 
  0.955
CC1G_09014
Ras opposite; Belongs to the STXBP/unc-18/SEC1 family (735 aa)
     
 
  0.952
CC1G_00017
Protein transporter SEC22; Belongs to the synaptobrevin family (218 aa)
     
 
  0.949
CC1G_05016
Uncharacterized protein; Belongs to the syntaxin family (271 aa)
     
 
  0.949
CC1G_01432
Vesicular-fusion protein sec18 (854 aa)
     
 
  0.945
CC1G_07280
Vesicle-associated membrane protein 712; Belongs to the synaptobrevin family (225 aa)
     
 
  0.941
CC1G_01893
t-SNARE; Belongs to the syntaxin family (377 aa)
       
 
  0.922
SEC17
Vesicular-fusion protein SEC17; Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus (289 aa)
     
 
  0.912
CC1G_00222
Uncharacterized protein (384 aa)
       
 
  0.901
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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