STRINGSTRING
CC1G_06752 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06752" - Nuclear protein SNF4 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06752Nuclear protein SNF4 (413 aa)    
Predicted Functional Partners:
CC1G_10117
CAMK/CAMKL/AMPK protein kinase (692 aa)
     
 
  0.999
CC1G_03367
Uncharacterized protein (590 aa)
     
 
  0.996
CC1G_07875
other/CAMKK/ELM protein kinase (853 aa)
       
 
  0.873
CC1G_00138
Uncharacterized protein (457 aa)
     
 
  0.843
CC1G_14171
other/CAMKK/ELM protein kinase (452 aa)
       
 
  0.715
CC1G_02998
Uncharacterized protein (822 aa)
       
 
  0.708
CC1G_00809
Uncharacterized protein (1012 aa)
       
 
  0.680
CC1G_07643
Protein phosphatase type 1 (333 aa)
     
 
  0.677
CC1G_11893
GMP synthase (538 aa)
   
 
  0.622
CC1G_06482
Cytoplasmic protein (343 aa)
   
 
  0.605
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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