STRINGSTRING
CC1G_06798 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06798" - recA/RAD51 family protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06798recA/RAD51 family protein (311 aa)    
Predicted Functional Partners:
CC1G_06263
Uncharacterized protein (329 aa)
       
 
  0.939
CC1G_03822
Rad51B protein (451 aa)
     
 
  0.887
CC1G_10538
DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays (343 aa)
     
 
  0.749
CC1G_06567
Uncharacterized protein (926 aa)
     
   
  0.744
CC1G_01808
Rad51; Belongs to the RecA family (364 aa)
     
 
  0.714
CC1G_02546
Uncharacterized protein (315 aa)
     
 
  0.712
CC1G_08633
Ku80 (855 aa)
           
  0.658
CC1G_09333
Uncharacterized protein (144 aa)
     
   
  0.641
CC1G_08102
Ku70 (559 aa)
           
  0.483
CC1G_00839
atypical/PIKK/ATM protein kinase (2922 aa)
           
  0.468
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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