STRINGSTRING
CC1G_03649 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03649" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03649Uncharacterized protein (894 aa)    
Predicted Functional Partners:
CC1G_08634
SNF2-family ATP dependent chromatin remodeling factor snf21 (1471 aa)
     
 
  0.942
CC1G_07733
Smarcc1 protein (761 aa)
     
 
  0.940
CC1G_08747
SWI/SNF complex 60 kDa subunit (407 aa)
     
 
  0.932
CC1G_15539
Uncharacterized protein (1341 aa)
     
 
  0.812
CC1G_02995
Snr1 (542 aa)
     
 
  0.802
CC1G_00100
Brg1-associated factor b; Belongs to the actin family (437 aa)
       
 
  0.718
CC1G_00279
Eukaryotic polypeptide chain release factor 3 (576 aa)
       
 
  0.713
CC1G_05319
Sin3b (1588 aa)
     
 
  0.564
CC1G_13724
Uncharacterized protein (195 aa)
     
 
  0.556
CC1G_06609
Uncharacterized protein (128 aa)
     
 
  0.556
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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