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CC1G_03708 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03708" - Polyadenylate-binding protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03708Polyadenylate-binding protein (433 aa)    
Predicted Functional Partners:
CC1G_13963
pumilio/RRM domain-containing protein (1304 aa)
       
 
0.739
CC1G_07077
Uncharacterized protein (839 aa)
       
 
  0.689
CC1G_11296
DCP2 (679 aa)
           
  0.614
CC1G_06779
Cytoplasmic protein (343 aa)
     
 
  0.611
CC1G_12096
Eukaryotic initiation factor 4F subunit P130 (1476 aa)
     
 
  0.551
CC1G_06756
Cap binding protein; Belongs to the eukaryotic initiation factor 4E family (301 aa)
     
 
  0.550
CC1G_04231
Pumilio (461 aa)
     
 
  0.539
CC1G_00279
Eukaryotic polypeptide chain release factor 3 (576 aa)
     
 
  0.532
CC1G_04648
U6 snRNA-associated Sm-like protein LSm4 (129 aa)
       
 
  0.509
CC1G_04203
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA (681 aa)
     
 
0.478
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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