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CC1G_03740 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_03740" - Pumilio-family RNA binding protein in Coprinopsis cinerea
Nodes:
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_03740Pumilio-family RNA binding protein (982 aa)    
Predicted Functional Partners:
CC1G_05830
Puf family RNA-binding protein (669 aa)
     
 
  0.806
CC1G_08578
ATP-dependent RNA helicase dhh1; Belongs to the DEAD box helicase family (509 aa)
       
 
  0.687
CC1G_06756
Cap binding protein; Belongs to the eukaryotic initiation factor 4E family (301 aa)
       
 
  0.632
CC1G_05036
Uncharacterized protein (351 aa)
     
 
  0.567
CC1G_10559
Uncharacterized protein (443 aa)
     
 
  0.527
CC1G_02282
Glucose-repressible alcohol dehydrogenase transcriptional effector (684 aa)
     
 
  0.498
PAN2
PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome- mediated 3’-5’ exonucleolytic degradation, or deadenlyation- dependent mRNA decaping and subsequen [...] (1099 aa)
     
 
  0.497
CC1G_07412
Uncharacterized protein (1403 aa)
       
 
  0.468
CC1G_03708
Polyadenylate-binding protein (433 aa)
       
 
  0.459
CC1G_01298
CCR4-NOT transcription complex (720 aa)
     
 
  0.455
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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