STRINGSTRING
CC1G_01682 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01682" - LAS1 in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01682LAS1 (498 aa)    
Predicted Functional Partners:
CC1G_04840
GRC3 (866 aa)
     
 
  0.981
CC1G_06770
Uncharacterized protein (631 aa)
     
 
  0.892
CC1G_10010
Uncharacterized protein (576 aa)
     
 
  0.874
CC1G_00979
pre-rRNA-processing protein IPI3 (503 aa)
     
 
  0.842
CC1G_09844
DNA helicase (822 aa)
           
  0.773
CC1G_08991
Ribosome production factor 1 (456 aa)
     
        0.623
CC1G_02297
Uncharacterized protein (390 aa)
     
        0.620
CC1G_09123
Rpa49 subunit specific to nuclear RNA polymerase I (435 aa)
     
        0.618
CC1G_10546
pre-rRNA-processing protein ESF1 (686 aa)
     
        0.604
CC1G_06377
Uncharacterized protein (382 aa)
     
        0.567
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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