STRINGSTRING
CC1G_01689 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01689" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01689Uncharacterized protein (439 aa)    
Predicted Functional Partners:
CC1G_13963
pumilio/RRM domain-containing protein (1304 aa)
       
 
  0.735
CC1G_03770
ATP-dependent RNA helicase SUB2 (432 aa)
     
 
  0.450
CC1G_09032
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (550 aa)
     
 
  0.421
CC1G_06756
Cap binding protein; Belongs to the eukaryotic initiation factor 4E family (301 aa)
     
 
  0.410
CC1G_10289
Nuclear matrix protein NMP200 (506 aa)
     
 
  0.407
CC1G_12379
U1 snRNP 70K protein (380 aa)
     
 
  0.406
CC1G_01186
Small nuclear ribonucleoprotein (281 aa)
     
 
  0.401
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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