STRINGSTRING
CC1G_01759 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01759" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01759Uncharacterized protein (352 aa)    
Predicted Functional Partners:
CC1G_00019
5’-3’ exoribonuclease 2 (1156 aa)
     
 
  0.680
CC1G_02924
Helicase sen1 (1960 aa)
     
 
  0.670
CC1G_09858
ATP-dependent RNA helicase dbp-4 (816 aa)
     
 
  0.662
CC1G_03919
Crm1-F1 (1077 aa)
     
 
  0.659
CC1G_11892
5’-3’ exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5’-3’ exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins (1468 aa)
     
 
  0.646
CC1G_09957
Uncharacterized protein (843 aa)
     
 
  0.632
CC1G_00617
Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation (665 aa)
   
 
  0.625
CC1G_00455
D-arabinose dehydrogenase (473 aa)
       
 
  0.620
CC1G_14285
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (672 aa)
     
      0.605
CC1G_00257
ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family (599 aa)
     
 
  0.600
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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