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CC1G_01786 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01786" - RNA binding protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01786RNA binding protein (355 aa)    
Predicted Functional Partners:
RRP36
rRNA biogenesis protein RRP36; Component of the 90S pre-ribosome involved in the maturation of rRNAs. Required for early cleavages of the pre-RNAs in the 40S ribosomal subunit maturation pathway (By similarity) (347 aa)
     
 
  0.937
CC1G_07516
Uncharacterized protein (475 aa)
     
      0.906
CC1G_09940
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (392 aa)
     
 
  0.854
CC1G_03677
Uncharacterized protein (247 aa)
     
      0.841
CC1G_05311
Protein MAK16; 66S preribosome component MAK16; Belongs to the MAK16 family (319 aa)
     
      0.837
CC1G_06853
ATP-dependent RNA helicase DBP10 (949 aa)
     
 
  0.833
CC1G_02297
Uncharacterized protein (390 aa)
     
        0.807
CC1G_08122
Nucleolar protein 14 (942 aa)
     
   
  0.772
CC1G_14965
Uncharacterized protein (422 aa)
     
 
  0.751
CC1G_00312
ATP-dependent rRNA helicase spb4 (646 aa)
     
 
  0.738
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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