STRINGSTRING
CC1G_01816 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_01816" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_01816Uncharacterized protein (565 aa)    
Predicted Functional Partners:
CC1G_05568
Transcription factor TFIIIB complex subunit brf1 (864 aa)
     
 
  0.959
CC1G_11381
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1403 aa)
     
 
  0.939
CC1G_11509
Transcription initiation factor TFIID-1 (308 aa)
     
 
  0.932
CC1G_11201
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1149 aa)
       
 
  0.906
CC1G_05154
Uncharacterized protein (505 aa)
     
 
  0.884
CC1G_14587
Uncharacterized protein (762 aa)
     
 
  0.854
CC1G_03641
Uncharacterized protein (282 aa)
       
 
  0.838
CC1G_12054
Uncharacterized protein (494 aa)
       
 
  0.834
CC1G_03416
Uncharacterized protein (210 aa)
       
 
  0.819
CC1G_00092
RNA polymerase III subunit Rpc34 (478 aa)
       
 
  0.819
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
Server load: low (10%) [HD]