STRINGSTRING
CC1G_06537 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06537" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06537Uncharacterized protein (969 aa)    
Predicted Functional Partners:
CC1G_10165
Autophagy protein 7 (689 aa)
           
  0.804
CC1G_07407
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (364 aa)
           
  0.737
CC1G_02298
Autophagy-related protein 3; Autophagocytosis associated domain-containing protein (423 aa)
           
  0.709
CC1G_10110
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
       
      0.709
CC1G_01942
Beclin 1 protein (488 aa)
           
  0.705
CC1G_11833
Ubiquitin (305 aa)
       
      0.691
CC1G_03676
Ubiquitin C (305 aa)
       
      0.691
CC1G_07289
Uncharacterized protein (2110 aa)
     
   
  0.690
CC1G_01076
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (858 aa)
     
   
  0.689
CC1G_14616
acetyl-CoA acetyltransferase (689 aa)
     
   
  0.687
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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