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CC1G_06554 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06554" - Uncharacterized protein in Coprinopsis cinerea
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06554Uncharacterized protein (428 aa)    
Predicted Functional Partners:
CC1G_10110
ubiquitin-60S ribosomal protein L40 fusion protein (128 aa)
     
 
  0.718
CC1G_11833
Ubiquitin (305 aa)
       
 
  0.708
CC1G_03676
Ubiquitin C (305 aa)
       
 
  0.708
CC1G_00876
ubiquitin-40S ribosomal protein S31 fusion protein (159 aa)
       
 
  0.702
CC1G_11031
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1341 aa)
     
 
  0.674
GET3
ATPase GET3; ATPase required for the post-translational delivery of tail-anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail- anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for insertion. S [...] (326 aa)
       
 
  0.598
CC1G_14872
Ubiquitin-protein ligase (1936 aa)
     
 
  0.558
CC1G_11229
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1745 aa)
     
 
  0.516
CC1G_15704
Delta 9-fatty acid desaturase (2306 aa)
     
 
  0.497
CC1G_14891
RING finger membrane protein (1522 aa)
     
   
  0.474
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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