STRINGSTRING
CC1G_06583 protein (Coprinopsis cinerea) - STRING interaction network
"CC1G_06583" - Nuclear mRNA splicing protein in Coprinopsis cinerea
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC1G_06583Nuclear mRNA splicing protein (841 aa)    
Predicted Functional Partners:
CC1G_05268
Uncharacterized protein (897 aa)
     
 
  0.988
CC1G_09203
Uncharacterized protein (588 aa)
     
 
  0.987
CC1G_00948
Uncharacterized protein (744 aa)
     
 
  0.987
CC1G_01761
Sec8 exocyst complex component specific domain-containing protein (1252 aa)
     
 
  0.987
CC1G_00165
Exocyst complex component protein (885 aa)
     
 
  0.985
CC1G_00148
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane (778 aa)
     
 
  0.967
CC1G_12117
F-box protein pof6 (911 aa)
     
 
  0.895
CC1G_01753
Exocyst protein (1086 aa)
     
 
  0.894
CC1G_12192
Rab-type small GTP-binding protein (208 aa)
     
 
  0.886
CC1G_15335
Uncharacterized protein (762 aa)
     
   
  0.865
Your Current Organism:
Coprinopsis cinerea
NCBI taxonomy Id: 5346
Other names: C. cinerea, Coprinopsis cinerea, Coprinus cinereus, Coprinus macrorhizus
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